Project:Policies specific to mappings: Difference between revisions

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== Introduction ==
== Introduction ==
lgbtDB includes a number of mappings to different ontologies and vocabularies. These mappings should always adhere to the [https://github.com/mapping-commons/sssom Simple Standard for Sharing Ontological Mappings] (SSSOM).
lgbtDB includes a number of mappings to different ontologies and vocabularies. These mappings should always adhere to the [https://github.com/mapping-commons/sssom Simple Standard for Sharing Ontological Mappings] (SSSOM) and the lgbtDB minimum criteria; it should be noted that lgbtDB mappings are narrower in scope than what SSSOM allows; therefore lgbtDB mappings can always be mapped to SSSOM but not vice versa. A mapping in lgbtDB is an instance of a reference that adheres to the minimum criteria below.


== Creating Mappings ==
== Creating Mappings ==
=== Minimum Criteria ===
=== Minimum Criteria ===
{| class="wikitable"
{| class="wikitable"
|+ Caption text
|-
|-
! lgbtDB Property !! SSSOM Name !! Allowed Values !! Example(s) !! Comment(s)
! lgbtDB Property !! SSSOM Name !! Allowed Values !! Example(s) !! Comment(s)
|-
|-
| X || subject_id || Example || Example || Required by SSSOM.
| [[Property:P561|P561]] (mapping subject) || [https://mapping-commons.github.io/sssom/subject_id/ subject_id] || Example || Example || Required by SSSOM.
|-
|-
| [[Property:P280|P280]] (mapping relation) || predicate_id || Example || Example || Required by lgbtDB.
| [[Property:P615|P615]] (mapping predicate) || [https://mapping-commons.github.io/sssom/predicate_id/ predicate_id] || Example || Example || Required by lgbtDB.
|-
|-
| X || object_id || Example || Example || Required by SSSOM.
| [[Property:P562|P562]] (mapping object) || [https://mapping-commons.github.io/sssom/object_id/ object_id] || Example || Example || Required by SSSOM.
|-
|-
| X || mapping_justification ||  
| [[Property:P558|P558]] (mapping justification) || [https://w3id.org/sssom/mapping_justification mapping_justification] ||  
* background knowledge-based matching process
* background knowledge-based matching process
* composite matching process
* composite matching process
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* semantic similarity threshold-based matching process
* semantic similarity threshold-based matching process
* structural matching process
* structural matching process
* unspecified matching process || X || Required by SSSOM.
* unspecified matching process
 
|| X || Required by SSSOM.
| mapping subject source || subject_source || Example || Example || Required by lgbtDB.
|-
| [[Property:P278|P278]] (mapping subject source) || [https://w3id.org/sssom/subject_source subject_source] || Example || Example || Required by lgbtDB.
|-
| [[Property:P559|P559]] (mapping subject source version) || [https://w3id.org/sssom/subject_source_version subject_source_version] || Example || Example || Required by lgbtDB.
|-
| [[Property:P279|P279]] (mapping object source) || [https://w3id.org/sssom/object_source object_source] || Example || Example || Required by lgbtDB.
|-
|-
| mapping object source || object_source || Example || Example || Required by lgbtDB.
| [[Property:P560|P560]] (mapping object source version) || [https://w3id.org/sssom/object_source_version object_source_version] || Example || Example || Required by lgbtDB.
|-
|-
| mapping subject source version || subject_source_version || Example || Example || Required by lgbtDB.
| [[Property:P21|P21]] (stated in) || [https://w3id.org/sssom/mapping_provider mapping_provider] || Example || Example || Required by lgbtDB.
|-
|-
| mapping object source version || object_source_version || Example || Example || Required by lgbtDB.
|}
|}


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=== Additional Criteria ===
=== Additional Criteria ===
*
{| class="wikitable"
|-
! lgbtDB Property !! SSSOM Name !! Allowed Values !! Example(s) !! Comment(s)
|-
| [[Property:P390|P390]] (creator) || [https://mapping-commons.github.io/sssom/creator_id/ creator_id] || X || X || Indicates the person(s) or group(s) responsible for the creation of the mapping in its published form.
|-
| [[Property:P447|P447]] (license) || [https://mapping-commons.github.io/sssom/license/ license] || X || X || X
|-
| [[Property:P335|P335]] (mapping cardinality) || [https://w3id.org/sssom/mapping_cardinality mapping_cardinality] ||
*[[Item:Q20186|one-to-one]]
*[[Item:Q20187|one-to-many]]
*[[Item:Q20188|many-to-many]]
|| Example || Example
|-
| [[Property:P566|P566]] (mapping tool) || [https://w3id.org/sssom/mapping_tool mapping_tool] || X || X || X
|-
| [[Property:P567|P567]] (mapping tool version) || [https://w3id.org/sssom/mapping_tool_version mapping_tool_version] || X || X || X
|-
| [[Property:P58|P58]] (date published) || [https://mapping-commons.github.io/sssom/publication_date/ publication_date] || X || X || X
|-
| [[Property:P565|P565]] (confidence score) || [https://w3id.org/sssom/confidence confidence] || X || X || X
|-
| [[Property:P563|P563]] (semantic similarity score) || [https://mapping-commons.github.io/sssom/semantic_similarity_score/ semantic_similarity_score] || X || X || X
|-
| [[Property:P564|P564]] (semantic similarity measure) || [https://mapping-commons.github.io/sssom/semantic_similarity_measure/ semantic_similarity_measure] || X || X || X
|-
|}


== See Also ==
== See Also ==

Latest revision as of 17:06, 18 July 2024

Introduction

lgbtDB includes a number of mappings to different ontologies and vocabularies. These mappings should always adhere to the Simple Standard for Sharing Ontological Mappings (SSSOM) and the lgbtDB minimum criteria; it should be noted that lgbtDB mappings are narrower in scope than what SSSOM allows; therefore lgbtDB mappings can always be mapped to SSSOM but not vice versa. A mapping in lgbtDB is an instance of a reference that adheres to the minimum criteria below.

Creating Mappings

Minimum Criteria

lgbtDB Property SSSOM Name Allowed Values Example(s) Comment(s)
P561 (mapping subject) subject_id Example Example Required by SSSOM.
P615 (mapping predicate) predicate_id Example Example Required by lgbtDB.
P562 (mapping object) object_id Example Example Required by SSSOM.
P558 (mapping justification) mapping_justification
  • background knowledge-based matching process
  • composite matching process
  • instance-based matching process
  • lexical matching process
  • lexical similarity threshold-based matching process
  • logical reasoning process
  • manual mapping curation
  • mapping chaining-based matching process
  • mapping inversion-based matching process
  • semantic similarity threshold-based matching process
  • structural matching process
  • unspecified matching process
 X Required by SSSOM.
P278 (mapping subject source) subject_source Example Example Required by lgbtDB.
P559 (mapping subject source version) subject_source_version Example Example Required by lgbtDB.
P279 (mapping object source) object_source Example Example Required by lgbtDB.
P560 (mapping object source version) object_source_version Example Example Required by lgbtDB.
P21 (stated in) mapping_provider Example Example Required by lgbtDB.

Suggested Criteria

Additional Criteria

lgbtDB Property SSSOM Name Allowed Values Example(s) Comment(s)
P390 (creator) creator_id X X Indicates the person(s) or group(s) responsible for the creation of the mapping in its published form.
P447 (license) license X X X
P335 (mapping cardinality) mapping_cardinality Example Example
P566 (mapping tool) mapping_tool X X X
P567 (mapping tool version) mapping_tool_version X X X
P58 (date published) publication_date X X X
P565 (confidence score) confidence X X X
P563 (semantic similarity score) semantic_similarity_score X X X
P564 (semantic similarity measure) semantic_similarity_measure X X X

See Also

References

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